U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

SRX22985835: TraDIS of E. coli strain MS69-1
1 ILLUMINA (Illumina NovaSeq 6000) run: 16.8M spots, 5G bases, 1.4Gb downloads

Design: Nextera-TruSeq
Submitted by: University of Illinois at Chicago
Study: E. coli TraDIS
show Abstracthide Abstract
We conducted Transposon Directed Insertion-Site Sequencing (TraDIS) on three different strains of Escherichia coli. We determined the number of unique mutants: 1) as a function of recovery time after electroporation (0.5, 1 or 2 hrs); and 2) as a function of selection medium (agar plates or liquid broth). For the recovery analysis, we also compared the recovery of transposon-DNA junctions based on the layout of sequencing library fragments (Nextera-TruSeq hybrid, or TruSeq-TruSeq).
Sample: MIGS Cultured Bacterial/Archaeal sample from Escherichia coli MS 69-1
SAMN00189184 • SRS150866 • All experiments • All runs
Library:
Name: HM347-liq-6h-Rep1
Instrument: Illumina NovaSeq 6000
Strategy: Tn-Seq
Source: GENOMIC
Selection: PCR
Layout: PAIRED
Runs: 1 run, 16.8M spots, 5G bases, 1.4Gb
Run# of Spots# of BasesSizePublished
SRR2730852016,809,9835G1.4Gb2024-03-21

ID:
31057254

Supplemental Content

Recent activity

Your browsing activity is empty.

Activity recording is turned off.

Turn recording back on

See more...